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paleoanthropology, genetics and evolution

Positive selection on the killer whale mitogenome.

Thu, 2012-02-23 21:50 -- John Hawks
TitlePositive selection on the killer whale mitogenome.
Publication TypeJournal Article
Year of Publication2011
AuthorsFoote, AD, Morin, PA, Durban, JW, Pitman, RL, Wade, P, Willerslev, E, Gilbert, TMP, da Fonseca, RR
JournalBiology letters
Volume7
Issue1
Pagination116-8
Date Published2011 Feb 23
ISSN1744-957X
Keywordscetaceans, energetics, mtDNA, non-primate, selection, whales
Abstract

Mitochondria produce up to 95 per cent of the eukaryotic cell's energy. The coding genes of the mitochondrial DNA may therefore evolve under selection owing to metabolic requirements. The killer whale, Orcinus orca, is polymorphic, has a global distribution and occupies a range of ecological niches. It is therefore a suitable organism for testing this hypothesis. We compared a global dataset of the complete mitochondrial genomes of 139 individuals for amino acid changes that were associated with radical physico-chemical property changes and were influenced by positive selection. Two such selected non-synonymous amino acid changes were found; one in each of two ecotypes that inhabit the Antarctic pack ice. Both substitutions were associated with changes in local polarity, increased steric constraints and α-helical tendencies that could influence overall metabolic performance, suggesting a functional change.

DOI10.1098/rsbl.2010.0638
Alternate JournalBiol. Lett.
Citation KeyFoote:2011
PubMed ID20810427

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