john hawks weblog

paleoanthropology, genetics and evolution

paleoclimate

  • Dead Dead Sea prehistory

    Fri, 2011-12-09 20:03 -- John Hawks

    Emily Sohn reports on a drilling project that is bringing to light ancient drying episodes in the Dead Sea basin: "A dry Dead Sea before biblical times".

    At a level corresponding with 120,000 years ago, during a warm period between ice ages, the researchers found a layer of small round pebbles sitting on top of 45 meters (nearly 150 feet) of thick salt deposits. Those pebbles, they announced this week at a meeting of the American Geophysical Union in San Francisco, look just like the rocks that normally appear on the lake's beaches -- suggesting that one of the deepest parts of the lake was once dry.

    Information about human occupation of the Levant and Arabian peninsula is getting crowded between 120,000 and 100,000 years ago. A total drying of the Jordan basin around the last interglacial would make things very interesting. Imagine the ancient artifacts on those beaches encased in meters of salt under the brine.

  • Finding where datasets line up

    Wed, 2011-12-07 18:44 -- John Hawks

    Adam Van Arsdale comments on a new paper [1] that tries to correlate variability in paleoclimates with human evolutionary events: "Paleoanthropology with 3D glasses".

    Separate from their analysis of the climate data, the authors conclusion regarding human evolution is based on the correlation between their climate analyses and a specific human evolutionary model. Given a different model (part E of the figure above), this correlation wouldn’t necessarily exist. And yet this kind of approach, combining information from different (hopefully somewhat independent) lines of evidence to address single hypotheses, is what paleoanthropology is primed for.

    He hat tips the "Broadly Consistent Watch" feature here, which I badly need to revive...


    References

    1. Donges JF, Donner RV, Trauth MH, Marwan N, Schellnhuber H-J, and Kurths J. 2011. Nonlinear detection of paleoclimate-variability transitions possibly related to human evolution. Proceedings of the National Academy of Sciences of the United States of America.
  • La Cotte de St. Brelade profiled

    Thu, 2011-09-01 23:11 -- John Hawks

    The BBC is running a nice article about the ongoing excavations on the island of Jersey at La Cotte de St. Brelade. "Neanderthal survival story revealed in Jersey caves".

    La Cotte's collapsed cave system contains intact ice age sediments spanning a quarter of a million years, revealing a detailed sequence of Neanderthal occupation and occasional abandonment, against a background of changing climate.

    "The site is the most exceptional long-term record of Neanderthal behaviour in North West Europe," says Dr Matt Pope from the Institute of Archaeology at University College London.

    It's a neat site and the Beeb are doing an episode of "Digging for Britain" about it this month.

  • The paleolakes of Egypt

    Fri, 2010-12-03 13:08 -- John Hawks

    A paper in the December issue of Geology, by Ted Maxwell and colleagues [1], describes evidence for a "Lake Erie-sized" paleolake in southwestern Egypt. The existence of a large ancient lake has been suspected for many years based on the presence of fish fossils in Middle Pleistocene contexts far from any current body of water. The new paper uses range-sensing imagery to assess the likely extent of the paleolake from elevation data, one known occurrence of fish fossils, and landscape features that appear to substantiate an ancient lake terrace:

    We believe that the middle and late Pleistocene drainage was influenced by repeated Nile flooding, following on the working hypothesis of Haynes (1985), who suggested a large Pleistocene lake that drained into the Nile from what he termed the Kiseiba-Dungul depression. Using the elevation of the fossil (Middle Paleolithic) Nilotic fish found at Bir Tarfawi (Van Neer, 1993) as a base level, the SRTM data indicate that a paleolake at that level (247 m) would have flooded the entire Kiseiba-Tushka depression (Fig. 3), and is the same elevation at which the Selima paleochannels and other channel remnants to the west blend into the terrain (Fig. 2). We interpret the combination of topographic coincidence and ages of Middle Paleolithic occupations at Selima and Tarfawi as evidence of at least one lake level at that elevation, forming a local base level, reducing the competence of inflowing streams, and inhibiting channel incision below ∼247 m. Such a lake would have covered an area of 68,200 km2, and would have extended from the Sudan border (22°N) north to the Kharga and Dakhla Oases, until dammed by the limestone plateau at 26°N.

    They believe that the lake would have been filled by Nile outflow. The paper does not commit to any chronology, except to point out that a few late Acheulean sites are present in the basin near a presumed lower lake level of 190 m, which may represent a relatively stable size, flooded once or multiple times to the higher level of 247 m. Wired has a nice short description of the paper, which includes some dates that are not actually discussed in the paper.

    A better understanding of the Nile corridor is of course very important to the issue of human movement into and out of Africa during the Late Pleistocene. More recent Late Pleistocene and Holocene paleolakes are known up and down the Nile valley, from the Fayum to Darfur.

    I wonder if a Nile corridor that was ostensibly more habitable may have actually excluded gene flow back into Africa. A denser and more stable human population in this area would have been a relative population source much of the time, sending migrants out into adjacent regions. These regions would have been much less habitable at some times, but displacement of the large Nile valley population may have been impossible. Furthermore, a larger Nile corridor population would have been a reservoir for endemic parasites and diseases that would have posed challenges for migrants into the region.

    The problem on an evolutionary timescale is not getting people out of Africa, but explaining the level of population structure between regions that constantly shared an overland and shoreline connection.


    References

    Synopsis: 
    Acheulean-era people may have lived along an Erie-sized lake in the Nile corridor.
  • Toba "cut down to size"

    Wed, 2010-12-01 15:29 -- John Hawks

    Thanks to a reader:

    Science last week carried a news article by Naomi Lubick, describing a new model for the climatic effects of the Toba volcanic eruption, around 74,000 years ago.

    The simulation revealed that Toba's impact was not as extreme as some scientists believed. Temperatures dipped only 3˚ to 5˚C across the globe, for example. The model also showed that the high concentrations of sulfur particles were short-lived; they settled out of the stratosphere—where they can have the largest cooling effect—within 2 to 3 years, the team reports online this month in Geophysical Research Letters. Extreme temperature changes in Africa and India lasted only a year or two, with a temperature decrease of at most 10˚C in the first year after the eruption, followed by 5˚C the second year. Overall, Toba didn't wipe out flora and fauna, Timmreck says, but it would have made life harder for a few years.

    The issue comes down to the assumptions they have to make when they scale up the measured effects of recent volcanic eruptions such as Mt. Pinatubo, Philippines. The new model is argued to be consistent with ice core data about atmospheric sulfate concentrations after the eruption.

    I think these climate models continue to shift too much to really interpret the importance for ancient human populations. A global reduction in temperature and biosphere productivity is not going to be happy times for most Pleistocene hunter-gatherers. But the kind of extreme, prolonged population contraction seems like it must require a rather more severe event, seriously forcing global climates out of their

    I've been a very consistent Toba skeptic, because a global catastrophic event in the Late Pleistocene really is not required to explain the present pattern of human genetic diversity. But with a little clever science, it might become possible to look for more temporary effects, or those limited to a few regions of the world. What's necessary is to bring the expectations into the same range of realistic alternatives.

    In that view, a more precise climate model that may show a shorter and smaller range of climate effects may be very useful.

  • Orangutan dynamics of Borneo

    Wed, 2010-11-24 01:46 -- John Hawks

    Bornean and Sumatran orangutans are the most highly divergent subspecies within any of the living species of great apes. The two farther apart even than chimpanzees and bonobos, which are good biological species. The time of the Bornean-Sumatran orangutan divergence as estimated from mtDNA is around 3.5 million years ago.

    This is old enough that many primatologists consider the two populations as separate biological species. The species distinction is supported by some aspects of morphology, but as yet we have no good nuclear DNA information about the extent of divergence. In chimpanzees, nuclear genetic comparisons suggest a relatively recent founding of one subspecies and recurrent gene flow between the others, despite high mtDNA divergence between the subspecies. So information from across the genomes of Bornean and Sumatran orangutans may be necessary to substantiate the hypothesis of long isolation suggested by mtDNA.

    Within Borneo, different local populations of orangutans have strong genetic differentiation, with few shared mtDNA haplotypes among them. A new study by Natasha Arora and colleagues [1] has provided further detail about these relationships within Borneo. Based on earlier work, they expected to find high population differentiation within Borneo, and that is what they found:

    [O]ur analyses revealed high and significant mitochondrial differentiation, with populations within currently recognized subspecies generally displaying as much differentiation as those between subspecies. Of notable interest is the great extent of subdivision and lack of reciprocal monophyly for the morphologically recognized subspecies P. p. morio and P. p. wurmbii. MtDNA haplotype sharing is uncommon and for populations separated by rivers occurs only in two instances: (i) for SA and GP and (ii) for the northern and southern populations across the Kinabatangan river. In both cases, very recent common ancestry could explain the incomplete mtDNA lineage sorting. For North Kinabatangan (NK) and SK, Jalil et al. (27) proposed an expansion from a recent common refugium further west in Mount Kinabalu, as posited for other Bornean species (46, 47, 49). DV, with its low haplotype diversity, might also be the result of a recent range expansion. GP is located proximally to the Bangka–Belitung–Karimata–Schwaner divide, from where orangutans are presumed to have dispersed to the rest of Borneo (12) and where we might expect a rich haplotype diversity. However, the presence of only one mtDNA haplotype shared with populations further east suggests that the current population in GP is recent and/or underwent a severe recent bottleneck. This and other local bottlenecks make it impossible to reconstruct a colonization of Borneo through the southwestern “choke point” (52).

    They were able to confirm the relatively strong differentiation of Bornean populations by examining nuclear microsatellites. These do not give a great indication of the time period over which the populations may have developed their differentiation, but the microsatellites do document the relative lack of allele sharing between the populations, attesting a history of low gene flow in the recent past. The populations they identify as strongly differentiated do not correspond entirely with the subspecies recognized along morphological lines, but there are strongly differentiated populations here.

    The "news" aspect of the paper is the one unexpected observation: the mtDNA ancestor of Bornean orangutans lived relatively recently, only around 176,000 years ago (with a range of error stretching from 72,000 to 320,000 years ago. The data in the study do not allow us to distinguish whether this was a time when the Bornean population may have been founded, or whether instead the mtDNA lineage spread through pre-existing populations. The authors pursue the hypothesis that Bornean orangutans were limited to a refugium sometime during the early Late Pleistocene:

    Assuming that orangutans arrived in Borneo around the same time as gibbons and macaques, the recent coalescence of Bornean orangutans could be explained by a bottleneck through a severe rainforest contraction. Such a bottleneck would have had a more dramatic impact on the mtDNA structure of orangutans compared with other species as a result of their low densities and slow life histories (18) as well as habitat requirements.

    The comparison with gibbons and macaques is necessary because both have substantially deeper mtDNA coalescence times within their Bornean populations. If the forest had been substantially reduced to a small area where orangutans could survive, we might expect the other primates to reflect this event -- and they don't. Nevertheless, a grab-bag of climate change scenarios appear next:

    Geomorphological and palynological data indicate the presence of dryer, more open vegetation in southern and western Borneo during the last glaciation (2, 41), and by extrapolation also during other glaciations (but c.f. refs. 42, 43). Climate change was especially severe during an extended cold period within the penultimate glaciation between 130 and 190 ka (44, 45), which occurred approximately at the time of mean coalescence of Bornean mtDNA haplotypes. More recently, the last Toba eruption approximately 74 ka resulted in a short, albeit signi␣cant, decrease in regional temperatures, ensued by a 1,800-y cold stadial (9, 10). Our data do not provide clear signals to make conclusive statements about potential Toba effects. Nonetheless, the coldest period of the penultimate glaciation (44, 45) was more prolonged than the cold period following the last Toba eruption, suggesting more severe effects of the former on the extent of rainforest across Sundaland. In any event, suitable rainforest habitat for orangutans should have existed in certain regions in Borneo where a refugium population survived the dry glacial conditions.

    A coalescence time of 176,000 years ago does not point to a short-duration bottleneck that began 74,000 years ago. If orangutans in the Middle Pleistocene of Borneo had high genetic differentiation, a crash would have to have been very severe -- eliminating all but one small regional population -- to have effected the present distribution. Still, the great uncertainty in the actual coalescence time leaves open many possibilities, and the refugium hypothesis in the general case is worth testing, even if the Toba eruption in particular cannot explain the data.

    Given the uncertainty about the habitat structure of the now-submerged areas of Sunda, we may also want to consider the hypothesis that the present orangutans arrived recently on Borneo from mainland Southeast Asia. Even if orangutans had lived on Borneo during the Middle Pleistocene, they may not have been the current orangutans. Or even better, they may have been Neanderorangs -- an initial population that was genetically swamped by migrants arriving from elsewhere. The deep Sumatra-Borneo divergence means that the Bornean population was probably not recently derived from Sumatra, but that's a very restricted source compared to the Late Pleistocene distribution of orangutans across mainland and island East and Southeast Asia.

    Some other animals walked from Sumatra to Borneo repeatedly during the Pleistocene, including humans. In the human case, we know that a large fraction of the genetic ancestry of Bornean and Javan people was derived from Asia within the last 100,000 years -- in other words, Late Pleistocene gene flow. The movement of genes may have happened in the context of a dispersal of Asian (or ultimately, African-derived) populations into island Southeast Asia. The paper includes some discussion of other primate species:

    For instance, the south Bornean gibbon Hylobates albibarbis and the Sumatran–Malaysian gibbon Hylobates agilis have a TMRCA of 1.56 Ma (36), and Bornean and Sumatran pig-tailed macaques have one of 3 to 4 Ma (37). By contrast, the Bornean–Sumatran common ancestor of both the silvered langur(39) and clouded leopard (40) is much more recent than that of orangutans, gibbons, and pig-tailed macaques, probably because of a higher ␣exibility in habitat use.

    The pig-tailed macaque divergence time is more or less the same as the orangutan divergence; the others are more like the time range for human dispersals into island Southeast Asia. We can add to the primates a few other medium-sized mammals; for example, clouded leopards are highly differentiated between Sumatran and Bornean populations, and their mtDNA divergence occurred sometime after 3 million years ago.

    There may be no contradiction between the recent mtDNA common ancestor and the high degree of population structure in Bornean orangutans; the mtDNA could have been selected. We really would want resequencing of a lot more loci in these orangtuan populations, for which we may not have to wait too long. Mitochondrial DNA is convenient in many ways, including its greater sensitivity to restricted population size and higher mutation rate. But the intrinsic variance of a single gene system under genetic drift is so high that this disadvantage probably outweighs all advantages for reconstructing population sizes.

    At any rate, the orangutans now provide an additional case where the subspecies-level history of hominoids is more complex than depicted five or six years ago. Uncovering these kinds of dynamics highlights the need for better modeling of demography and dispersal within a geographically widespread species. Isolation-by-distance and long-lasting subspecies are well-defined models, but when they are refuted, we have a lack of well-defined alternatives.


    References

  • The Neandertals of Mount Doom

    Mon, 2010-10-11 16:07 -- John Hawks

    Well, I already snarked on the science headlines that have been claiming volcanoes "wiped out" the Neandertals. Some variation of this story, swapping in a different Neanderkiller, has been circulating since around 1890. But is there any truth to the headlines?

    (see UPDATE below)

    The source of the story is a paper in the October issue of Current Anthropology, by Golovanova and colleagues [1]. The paper reviews the chronology of Mezmaiskaya Cave, a site occupied by Neandertals and successive Upper Paleolithic peoples, in the Russian Caucasus. This site produced the skeleton of an infant, from which DNA evidence has been recovered. As Golovanova and colleagues describe, the deposit additionally contains volcanic ash from two eruptions that happened around 40,000 years ago.

    The latter of the two eruptions appears to coincide with a long abandonment of the site:

    Hominin occupation of Mezmaiskaya Cave changed dramatically after the later volcanic eruption represented in layer 1D. This eruption was probably more powerful than that in layer 2B-1. Layer 1D has a thickness up to 0.7 m and in some areas is composed of a relatively clean sediment lacking any inclusions (fig. A10). Limestone fragments, bones, and lithic artifacts are absent, and even pollen grains are rare. Pollen data show that extreme deterioration to a very cold and dry climate occurred in this time period....A chemical analysis of layer 1D indicates that the volcanic ash apparently derives from an eruption in the Kazbek volcanic province that occurred around 40,000 years ago. Because no Neanderthal specimens or MP lithic industries postdate layer 1D at Mezmaiskaya, this eruption seems to have significantly disrupted the ecological niche of local Neanderthals, possibly resulting in their rapid disappearance in this region.

    The Kasbek volcanic province is in the Caucasus, so we're talking about a large eruption relatively local to the site. This is the sort of event you might well expect to have a strong impact on a dispersed hunter-gatherer population. The Middle Paleolithic people (presumably Neandertals) might have locally declined in numbers, or they might have moved on. The region need not have been abandoned entirely; a new population might have entered the area without using the same site. In this case, when new people began to use the site much later, the newbies were using an Upper Paleolithic industry.

    A relatively local effect of volcanism in the Caucasus is one thing, but the extinction of Neandertals across western Eurasia is quite a bit more. How does the paper go from local event to a regional extinction?

    The local eruption was the second event to leave ash in the Mezmaiskaya sequence. The first was a different eruption from Mt. Elbrus, which had a smaller impact than the second, as discussed below.

    At issue in the paper is the possible coincidence of the second eruption and consequent abandonment of the site with a much larger volcanic event in Italy:

    The CI [Campanian Ignimbrite] eruption from the Phlegrean Fields, southern Italy—the largest eruption documented in the Mediterranean region during the past 200,000 years (Wohletz, Civetta, and Orsi 1999)—drastically impacted European ecosystems. The most recent numerical (40Ar/39Ar) age determinations for CI eruption vary from to BP and cluster around 40,000 BP (Fedele, Giaccio, and Hajdas 2008:839).

    This eruption produced the CI in Italy and Y5 tephra in Central and Eastern Europe and Eastern Mediterranean (Fedele et al. 2003; Fedele, Giaccio, and Hajdas 2008). High-altitude clouds of volcanic ash from this eruption had a significant effect on global climate. The resulting ash fall covered km2 of land and sea (fig. 1), and the Y5 tephra layer accumulated in the Eastern Mediterranean as far as Cyprus—more than 1,500 km from its source (Mussi 2001:191). The Y5 tephra is also identified in the EUP sequence at Kostenki in the Middle Don River in Russia (Holliday et al. 2007). In Eastern Europe, the ash layer varies from 1–2 cm in the eastern limit (between Penza and Rostov) to 5–8 cm in the west and southwest (southern Ukraine and Moldova) and averages about 3–4 cm (Laverov et al. 2005:51). Obviously, the area affected by this ash fall was much larger than the documented Y5 tephra sites.

    Golovanova and colleagues propose the hypothesis that the climate effects of this CI event caused the demise of the Neandertals:

    Our new data provide support for the hypothesis that the MUP transition in western Eurasia coincides with one of the most globally significant volcanogenic catastrophic events in the recent history of the earth. The large and coeval volcanic eruptions (from an unusually large CI eruption in the Apennines to a smaller eruption in the Caucasus) had a sudden and devastating effect on the ecology and forced the fast and extreme climate deterioration (so-called volcanic winter, perhaps comparable to the effect of nuclear winter) of the Northern Hemisphere in the beginning of Heinrich Event 4. We guess that this catastrophe likely may have both drastically destroyed the ecological niches of Neanderthals, possibly resulting in the mass death of hominins and prey animals and the severe alteration of foraging zones, and caused Neanderthal depopulation from Central Europe to the Caucasus.

    That's a very clearly stated hypothesis. A volcanic eruption initiated climate effects that the regional population of Neandertals could not survive.

    However, Golovanova and colleagues include in their paper several critical facts that run against this hypothesis:

    1. The Mezmaiskaya sequence itself shows Middle Paleolithic people returning and proliferating after a large relatively local eruption. The Elbrus eruption apparently left ash in layer 2B-1, with a low density of bones and a very low frequency of bison compared to caprids. The excavators interpret the layer as a very low-intensity use of the cave. The pollen evidence suggests a "cold, dry climate". In other words, the paleoclimate and faunal evidence are both consistent with the hypothesis that the eruption had effects on Neandertal populations in the Caucasus. But then the Neandertals apparently returned in force:

    The intensity of site use increased, however, during the accumulation of the upper MP layers 2A and 2 when the climate become cool and wet. Although the lithic industry changed slightly after the environmental crisis of layer 2B-1, it still remained typically MP Eastern Micoquian. Skeletal and mtDNA evidence indicates that Neanderthals produced both the earlier and the later MP industries at Mezmaiskaya (Briggs et al. 2009; Golovanova et al. 1999; Green et al. 2010; Ponce de Leon et al. 2008). Thus, the late MP environmental crisis at the cave had repercussions for local Neanderthals but did not cause a break in the continuity of occupation or technology.

    That makes it seem pretty unequivocal. Neandertals survived and effectively adapted to at least one volcanic event in this area. That eruption did not kill them off, and it did not leave the area devoid of Neandertals in a way that facilitated a "modern human invasion."

    It was only after the second volcanic event that Middle Paleolithic people declined at the site.

    At issue is whether this second event was coincident with the CI eruption. The ash in the Mezmaiskaya sequence is not from the Y5 tephra, it is attributable to a much nearer source. I do not fully understand why the authors attribute this second event to the same time as the CI event; the time between layers 2 (terminal Mousterian) and 1C (early Upper Paleolithic) appears to have occupied a few hundred years, between 32,000 and 34,000 radiocarbon years BP. Calibration will move those dates older by a few thousand years (I discussed radiocarbon calibration a few years ago). But I think the CI eruption, around 40,000 years ago, doesn't fit well with this later event. It might fit with the earlier eruption, in my view, as Elbrus lava flows include 40,000 BP.

    In any event, I think the associations of either local volcanic event with the larger CI event is at best uncertain. The record at the site makes it pretty clear that Neandertals were effectively adapting to the changing local climates and faunal abundance that coincided with the first eruption.

    2. The initial Upper Paleolithic of Kostenki had appeared before the Y5 tephra was deposited. I wrote about the identification of this Y5 tephra at Kostenki a couple of years ago ("An earlier initial Upper Paleolithic at Kostenki"). As my post indicated, the identification of the ash layer with the Campanian Ignimbrite event suggested an earlier date for the initial Upper Paleolithic on the Russian Plain.

    From the standpoint of the Neandertal volcanic winter hypothesis, this sequence of events is a problem, which Golovanova and colleagues discuss:

    In any case, with or without the Kostenki addition, the few CI-bearing sites show that this eruption could have also extinguished the first wave (Proto-Aurignacian) of EMH expansion into Europe (Fedele, Giaccio, and Hajdas 2008): “At all key sites, where sedimentary resolution is good, the CI tephra directly seals archaeological layers that contain assemblages of the MUP mosaic, often variants of ‘Aurignacian’-like or so-called Early Upper Paleolithic Industries. … The layers above the CI tephra, where they are not culturally sterile, contain later and often much later properly defined Upper Paleolithic industries” (841). Thus, the CI-bearing sites demonstrate clear evidence of the break in habitation and culture change—a whole gamut of archaeological attributes for population replacement.

    The volcano is supposed to explain the MUP transition, but occurs earlier than the MUP transition in some areas, but later in others. Golovanova and colleagues propose an ad hoc hypothesis to account for this mismatch: some early Upper Paleolithic modern humans were also wiped out.

    Many researchers might find this idea tempting. It might, for example, explain why the (few) skeletal remains of the earliest Aurignacian people have such a high proportion of Neandertal features. We could propose that the initial Upper Paleolithic represents a degree of population mixture that later populations do not; the discontinuity between them could have been caused by climate extremes.

    But we don't need climate or volcanism. Later Upper Paleolithic people retained similarities to Neandertals, which reduced in frequency over time. This is most readily explained by continued gene flow into a sparse European population from West Asia. A volcano-induced climate catastrophe is superfluous: It doesn't add to the explanation of a sustained genetic transformation of Europe that continued through the later Upper Paleolithic and Neolithic.

    3. "Catastrophes" are not rare. The record of climate change during the last glaciation shows frequent strong oscillations. Some of these occurred at the same time as known eruptions, and so might be associated with them, but most climate oscillations have no obvious cause. Up to 40,000 years ago or so, the Neandertals survived them all. They survived the Toba event, largest eruption by volume in the Pleistocene, with no evidence of ill effects.

    The "intensity of occupation" of archaeological sites naturally fluctuated for many reasons. In Paleolithic contexts, sites were almost never inhabited continuously. We usually don't know why a local population returned more often to a site, or why the later population may have used the site less often, but those changes in pattern will make a big difference to the occupation intensity. It's not enough to show that a fluctuation in occupation intensity was coincident with an eruption or climate event -- such coincidences are inevitable even when "occupation intensity" changed randomly.

    What role volcanoes?

    Bad things happened in the past. Many of those bad things -- megadroughts, volcanoes, asteroid impacts, flesh-eating bacteria -- probably killed a lot of people.

    But our ability to find the effects of these death-dealing events is a lot more limited than you might assume. Less than a thousand years after the Black Death, how many signs of it are still evident today? To the exceedingly clever, who know where to look, there are a few. If we discount historical records, which do not exist for the Pleistocene, and limit ourselves to very small samples of bone and stone remains, it becomes very difficult to demonstrate this widespread epidemic, which reduced the population of some parts of Europe by up to half.

    Most Paleolithic sites document exceedingly low-intensity use of an area by ancient people, and have gaps of thousands of years. The hope of finding a single event with a short duration is near zero, unless it affected many sites in the same way.

    The extinction of a widespread group of hominids would be one kind of event we might test. In the current example, I think the data point to a clear conclusion: Not all Neandertals were killed, starved, or slowly declined due to the effects of any single volcanic eruption. Too many of them clearly survived the time of the large eruptions, and the available archaeological indicators suggest that their populations tended to recover after climate extremes had been reached. They were very resilient to climate change, more than many other mammals.

    It's not possible to rule out that one or more eruptions may not have had important effects, even ones that may have devastated some local populations. This is possibly the case at Mezmaiskaya. Nor is it possible to exclude the hypothesis that climate changes of greater and greater amplitude may have stressed their populations, contributing to the Neandertal demise.

    That's one of the returning frustrations of the archaeological record. An event might have been a major tragedy in human terms, but essentially invisible to us today. Meanwhile, the large-scale dynamics of human populations, including speciation and extinction, do not appear to fit the record of catastrophic eruptions. I don't see that as the end of the story, but a more interesting prologue to our understanding of ancient human dynamics.

    UPDATE (2010-10-16): I received a note from Golovanova and Doronichev, kindly pointing out a serious error in my post. I had misread their paper -- I described it as supporting a coincidence of CI with the first ash evidence at Mezmaiskaya, but the paper clearly argues that the CI event was "coeval" with the second ash, in layer 1D of the site.

    I have extensively updated the part of the post that refers to the CI eruption.

    I'm skeptical that the CI and Kazbek ashfalls could have happened near the same time, because the latter seems by radiocarbon evidence to be 2000 or more years later than 40,000 years ago. But the ESR dates are arguably consistent with the idea that the two eruptions coincided. I wouldn't push a chronology argument very far, not without a list of calibrated radiocarbon and ESR/TL dates from the relevant eruptions. But the multiplicity of events helps to reiterate the basic point that geological events happened, and fluctuations of site intensity happened, and it will take a coincidence across many sites to correlate the two.


    References

    Synopsis: 
    Eruptions in the Caucasus are claimed to explain Neandertal disappearance in that area. I demur.
  • "Neandertal stimulation": Weckler and biogeography

    Sat, 2010-09-25 14:27 -- John Hawks

    I'm reviewing some old viewpoints about the relationships of Neandertals and other peoples. These include mainstream opinions that persisted over decades as well as more idiosyncratic ideas. This is mostly pre-1960 stuff for the time being.

    To the extent that old ideas are wrong it is no surprise: Science progresses by rejecting wrong ideas, and paleoanthropologists of the past lacked the luxury of today's data. To the extent that the ideas look familiar, they remind us that our current hypotheses in many instances echo ideas that were advanced fifty years ago or more.

    Weckler's model

    A bit off the mainstream was a paper published by Joseph E. Weckler [1], titled "The relationships between Neanderthal Man and Homo sapiens." Weckler was a cultural anthropologist who had done fieldwork in the American Southwest and the South Pacific [2]. He wrote only one paper on Neandertals but this received substantial attention, first published in the American Anthropologist and later revised in a simplified version for Scientific American. Weckler was very interested in the migration and dispersal of ancient populations, maybe because of his work on the ethnography of the South Pacific. He brought that perspective to the Neandertals and other ancient groups.

    Weckler saw Pleistocene human population dynamics as having been directed by glaciations and geographic barriers. In general, Weckler thought that the pre-modern population had been divided into allopatric species or subspecies. These groups would have been isolated from each other much of the time, but occasionally thrust back into contact by shifts in the climate. During glacial phases, Weckler posited that Europe and Asia north of the Caucusus-Himalaya axis would have been uninhabitable. During warmer interglacials humans moved into these northern areas, where water and mountainous barriers tended to isolate them. The overall pattern was evolutionary differentiation punctuated by occasional hybridization and cultural contact between long-separated groups.

    Weckler was not the first to propose that Neanderthal and modern lineages had been relatively isolated and later hybridized. The idea was widespread after the description of the Mount Carmel remains by McCown and Keith [3]. McCown and Keith themselves had favored a different explanation -- that the Skhul and Tabun remains represented a transient between a less specialized and more specialized (Neandertal-like) extreme. Others, including Carleton Coon [4] and Theodosius Dobzhansky [5], immediately favored the idea that the Mt. Carmel sample represented a hybrid population.

    Weckler broadened the idea of hybridization into a general theme. He supposed that we might expect recurrent contact during second (Mindel-Riss) interglacial times in Central Asia, and repeated dispersal from India into Southeast Asia throughout the Pleistocene. Thus, hybridization between divergent groups was not a one-time affair but instead was a fundamental aspect of Pleistocene human evolution.

    Interglacial population contact

    This scenario faced an obvious problem: There were essentially no data to test the hypothesis of population contact at any of these earlier times. Only the third interglacial, already treated by other authors, gave the appearance of sufficient information for a test. To illustrate the plausibility of recurrent exchanges, Weckler fleshed out a third interglacial model of population contact in some detail:

    Some of these pre-Neanderthal men wandered inland into Asia north of 40° during a period of warm climate. Part of this population may subsequently have been trapped north of the barrier in the general vicinity of Inner Mongolia or Sinkiang at the onset of the next glacial period. Primitive man caught in this area would have been unable to retreat directly southward because the great mountain mass that lay in that direction became frigid sooner than the lower lands to the north. Having lived where he was for hundreds of generations, primitive man might not have known he could escape the increasingly rigorous climate by moving east several hundred miles before turning south. Howell (1951:409) suggested that some of the physical characteristics of classic Neanderthal man may represent biological adaptation to a glacial climate. Coon stated in a letter to me (1953) that he has long been of that opinion. If this is so, I suggest the evolution occurred, not in Europe during the fourth glaciation, but in eastern Asia during an earlier one (Weckler 1954:1010).

    This is an early exposition of the idea that Neandertals repeatedly invaded the west from a homeland somewhere in central Asia or further east. Weckler discussed the idea that these populations originated in northwestern China, but he had no good examples (as indeed there are still no such examples).

    Weckler's discussion may seem confused because he accepted Zhoukoudian as an eastern "Neanderthaloid" population. His division of humanity can best be aligned along a "paleanthropic/neanthropic" distinction. Today, we might more simply state his biogeographic model as a shifting border between the paleanthropic "Neanderthaloids" and neanthropic "Homo sapiens" along a shifting Movius line somewhere in India or the Middle East, stretching to northwestern China.

    A central Asian source

    Teshik Tash bears much importance to Weckler's ideas, as it did to Movius, Howell, Weidenreich, and many others. To those unfamiliar with the site, an interesting place to start is my interview with Mica Glantz. Teshik-Tash is once again central to our ideas of Neandertal biogeography, with the addition of genetic evidence from the juvenile specimen from the site and others in Central Asia.

    In the early 1950s, Teshik-Tash raised many of the same issues that it does today. Today, of course, Teshik-Tash is far from alone, with several sites in Central Asia bearing evidence of a local Mousterian, physical remains with Neandertal-like mtDNA sequences. There was great uncertainty about the date represented by the Teshik-Tash specimen. Teshik-Tash had a classic "Western" archaeological industry (in this case, Mousterian) and therefore evidenced long-range population contact with Europe. The East Asian fossil record was known to be very different from the west, raising the question of boundaries. Where did the Western sphere of biological influence end, and the Eastern begin?

    Today Denisova Cave, embedding a highly divergent mtDNA clade in an initial Upper Paleolithic assemblage [6], presents the same issues with even greater relief.

    Probably the most common interpretation of the Central Asian "Neandertal" sites is that they represent an eastward migration from the Neandertals' center of evolution in Europe. But the opposite hypothesis is an obvious alternative: that the center of Neandertal evolution was somewhere in Central Asia, and that they invaded Europe from outside. Some may see parallels for a Neandertal invasion of Europe from outside, by looking both earlier in evolution (the first Europeans obviously came from somewhere) and later (the Upper Paleolithic, the Neolithic).

    Why posit Central Asia in particular as a source area, above and beyond the general idea of invasion? I thought the idea might have originated with Henry Fairfield Osborn because of his long interest in Central Asia as a center of human evolution. For Osborn, Central Asia was a source of humanity, but his "Dawn Man" idea supposed that the modern human form had long resided in Central Asia, with more primitive humans at the periphery. The idea that a Neandertal center of evolution existed in Asia is quite different from Osborn's idea, which was itself a sketch supported by little evidence. I'll have more on Osborn later.

    Weckler presented his idea to address a classic problem: To many paleoanthropologists, early Neandertals appeared to be more like later human than were the later, "classic" Neandertals. Howell [7] summed up this observation as follows:

    Many features of early Neanderthal morphology, both cranial and postcranial, are incipiently classic Neanderthal. However, the general morphological pattern of these early Neanderthal peoples bore a close resemblance to that of anatomically modern man, a fact which indicates again the special character of classic Neanderthal morphology (Howell 1957:332-333).

    The early Neandertals were those from the third interglacial, which during the 1950's would have included those from Krapina, Ehringsdorf, and Saccopastore. Howell's description highlights the most common hypothesis: classic Neanderthals had evolved toward greater and greater specialization over time.

    Weckler took a different approach: for him, the fourth glaciation Neandertals descended from already-specialized ancestors, who had existed in Central Asia:

    The Asiatic migrants, probably already mixed with Homo sapiens in central Asia in the Middle East, pushed on to central Europe during the third interglacial. They may have moved northwestward from Palestine or directly westward along the north face of the barrier. In the zone of contact in western Asia and eastern Europe further miscegenation and cultural exchange probably occurred. Then, when the climate deteriorated with the onset of the fourth glaciation, the bulk of the Homo sapiens population retreated south as was its wont. This left Europe open to further Neanderthal invasion and set the stage for the modern misconception that classic Neanderthals evolved rapidly (and in a curiously regressive fashion) in western Europe during Würm I. Probably all that actually happened was that additional Neanderthals of more classic type, adjusted by previous experience to life in a cold climate, kept pushing in behind the advance guard and, by weight of numbers, blotted out the neanthropic traits the earlier migrants had acquired along the way.

    Weckler proposed this scenario not long after F. Clark Howell's 1952 paper [8], in which Howell had proposed that climate isolated Neandertals within Europe during the last glaciation, leading to their increasing specialization. According to Weckler, the glaciations had not isolated Europe so much as they had wiped clean the evolutionary slate within Europe. After the last interglacial, migration from a central Asian source brought back a purer strain of Neandertal.

    Out of this welter of fact and interpretation emerge the few concepts necessary to the hypothesis supported in this paper. By the end of third glacial times Neanderthal had probably developed in eastern Asia to something approximating the classic form. His numbers had probably always been small compared to developing Homo sapiens: his range was incomparably smaller, and in part of this range he had no easy retreat from glacial conditions such as Homo sapiens enjoyed. His restricted range (and possibly his sometimes severe habitat) had militated against the racial diversification that characterized the development of Homo sapiens. In spite of his cultural advances his range and numbers were probably sharply reduced during every glacial episode he had to endure. This may be why, although he stood athwart the entrance to the New World, he never expanded his range sufficiently to explore that territory. But as the climate ameliorated after the rigors of the third glaciation, his numbers increased and he did finally expand his range. For reasons not as yet ascertained he looked westward, and the lowlands north of the barrier afforded him a route to Europe.

    Several strains of contemporary thought emerge in Weckler's formulation. Neandertals were always on the edge of extinction, being repeatedly driven to low numbers by deteriorating climate. Their tenuous existence did not allow them to disperse more broadly.

    That old Neandertal magic

    Where Weckler differed from the received view is in the way he accentuated the Neandertal positives. He wrote that the diversification of humans and Neandertals presented an opportunity to the evolution of our species. From their central Asian source, the Neandertals had acquired innovations necessary for existence in the cold north. Human colonization of these regions might be impossible without the adoption of Neandertal cultural and behavioral innovations:

    The Homo sapiens groups that retreated south from Europe and perhaps from central Asia [during the glaciation] had been touched by Neanderthal magic. They may have acquired some Neanderthal physical traits, but, more important, they had achieved a new cultural outlook. They had perhaps learned the use of fire, clothing and specialized hunting techniques, and possibly of cave dwelling -- accomplishments that freed man from dependence on a mild climate and from a grubbing existence (emphasis added).

    I find myself reading this on two levels. On the concrete, empirical side, Weckler would soon be proven wrong. Neandertals didn't invent fire; that was much older and more broadly shared by Middle and Late Pleistocene humans. They may have had better clothes for cold weather than contemporaries who lived further south, but the innovations of woven cloth, sewn garments, and shoes happened later. They certainly had specialized hunting techniques, but these were linked to a particular kind of social organization and technology. Later developments in both would have required new hunting (and gathering) methods. None of them lived in caves very often; their experience must have been fairly "grubbing" in either event.

    But on the abstract, Weckler presents a scenario where Neandertals had something of value, cultural or physical, without which later humans would have been as successful. He had already posited biological hybridization; here he suggests a kind of "cultural hybridization" as well.

    The essential idea I am suggesting is that the contact of Homo sapiens groups with "Neanderthal culture" in Asia and in Europe during the third interglacial resulted in an efflorescence of "Homo sapiens cultures" that gave rise to the Upper Paleolithic. There is general agreement, I think, that a sudden enrichment of culture is evident at the beginning of the Upper Paleolithic in Europe and that these richer and more varied cultures seem to have originated, for the most part, outside of Europe. Movius, discussing the European Upper Paleolithic (1953:171ff.), follows M. Denis Peyrony, Dorothy Garrod, and others in suggesting that different European cultures of that time may have originated in Palestine, Iran, the plains of southern Russia, and possibly Africa. All but the latter are areas where indigenous Homo sapiens was probably directly stimulated during the third interglacial by invading Neanderthal man (Weckler 1954:1016).

    So why has this idea been largely forgotten? The failure of the particulars was almost complete:

    Leakey claimed in the 1930's that Lower Aurignacian techniques of stone chipping were older in Africa than in Europe (1931:237-39; 1936:54-60, 161). Movius seems ready to dismiss Africa as a source of European Aurignacian (1953:171), but he doesn't dispose of Africa's claim to temporal priority. The sudden new competence Leakey claims for African Aurignacian cultures early in the fourth glaciation (1936:161) may have been the consequence of contact with Neanderthal. The stimulation may have come secondhand from Homo sapiens wanderers returning from Europe or may have resulted directly via diffusion or migration from the Middle East.

    He was overreaching here. He didn't overestimate the cultural sophistication of Neandertals, although he did accentuate behaviors, like fire, that would turn out to be less special than he assumed -- older than Neandertals and more broadly shared. More critically, Weckler rested his argument on the absence of evidence for cultural sophistication in the African contemporaries of the Neandertals. But Louis Leakey's earlier claims about an "African Aurignacian" also overreached, supported by a mistaken chronology. A better understanding of the Late Pleistocene African cultural sequence would emerge only later.

    When Homo sapiens had thoroughly assimilated and improved on the ideas he got from Neanderthal, he took advantage of the first interstadial of the Würm glaciation to launch forth on his initial conquest of the world. He overran Europe and pushed around the barrier into eastern Asia.... One might even hazard the guess that the reason Africa south of the Mediterranean littoral remained so backward during the Upper Paleolithic was because the Homo sapiens groups there had not had the full benefit of Neanderthal stimulation. In the new dynamics of cultural enrichment and sapiens migrations the hinterlands of Africa had become a dead end, far removed from the centers of rapid development.

    I find myself wondering about the nature of "Neanderthal stimulation"....

    This passage is worth examination. Most of the details have changed radically since 1954. We now know that MSA Africans had most of the tricks that Neandertals did, and vice-versa. Many MSA industrial innovations predate Mousterian or Middle Paleolithic occurrences. The complexity within Africa may itself represent a vastness of population history that we now can only guess at.

    Yet the development of Upper Paleolithic cultural complexity still wants some explanation. The biological innovation of "anatomical modernity" is not sufficient to explain the cultural evolution of the Late Pleistocene -- it does not match the pattern of cultural innovation in time or space.

    Bottom line

    I think there was some "Neandertal magic." Middle Pleistocene humans were more isolated than present-day populations, for a longer period of time. Less gene flow made it less likely for adaptive traits to spread beyond the population where they originated. Not impossible, just less likely. So any surge of population contact caused by migration would have been accompanied by a surge of introgression of adaptive genes. The evidence for Neandertal contribution to the later gene pool of non-Africans documents one such surge of population contact, but there may well have been others.

    Where genes are concerned, this is a simple matter of mathematics, discussed more fully by Greg Cochran and I in our 2006 paper [9]. Simply put, Neandertals and modern humans had comparable selection pressures for many aspects of their biology, similar adaptive responses, and the same time to adapt. Adaptive mutations are chance events, governed by demography and time. If the evolving African MSA population got many new adaptive mutations, Neandertals would have gotten nearly as many (possibly constrained by smaller population size). In a few cases, the same variants would occur in both populations by chance, but in most they would be different. These alleles should still be with us, as the extent of Neandertal contribution to our population was great enough to pick up almost all of them.

    But what about Neandertal cultural traits? These were the real focus of Weckler's argument, and here I think the question is very difficult to resolve today. Cultures are ephemeral. As we know from history, if we choose a beginning and end point a few hundred years apart, it can be difficult to show the continuity of cultural information even within a single place.

    With the transition from Mousterian, through Châtelperronian into Aurignacian in France and northern Spain -- a place where we have relatively dense archaeological documentation -- we are nevertheless talking about time gaps of hundreds of years. I'm skeptical that we're in a position to test the hypothesis of cultural exchanges across these time periods.

    We're in a better position to test the hypothesis of stasis. If genetic exchanges happened in the absence of culture change, that would tell us something very relevant to the relation between gene flow and demographic contact. Likewise, persistent stasis of different cultures in adjacent areas tells us something about the absence of information flow. A kind of regional stasis, over thousands of years, seems to have been the norm in MSA and Middle Paleolithic contexts, and it's not a pattern that we are well-placed to understand without a better understanding of the limits on information exchange. Some of those limits may, in these ancient populations, have been biological constraints. So I'm less confident that we will be able to understand the cultural consequences of Neandertal contact.


    References

  • "Obviously [spores] are not nanodiamonds"

    Sun, 2010-06-27 10:28 -- John Hawks

    John Roach reports on the latest episode in the Younger Dryas impact scenario: "Fungi, Feces Show Comet Didn't Kill Ice Age Mammals?" A key piece of evidence supporting the idea of an impact is the presence of carbon microspherules in sediments of the right era. But people have increasingly noticed those spherules turn up all over the place:

    The new research, however, detected carbon spherules in soil layers from before, during, and after the Younger Dryas, making it hard to argue that the particles are products of a sudden impact.

    What's more, Scott's team found that most of the spherules are similar to tightly packed balls of fungus found in modern soils that have been exposed to low to moderate heat during wildfires. Plant and soil fungi are known to create these balls of material to help them survive extreme conditions.

    Other elongated forms of the spherules match modern fecal pellets from insects.

    "All these particles are of natural biological origin and are not related to either intense wildfires or cosmic impacts," Scott said in an email.

    That's one of the neat side effects of a debate like this -- it really compels a lot of investigation into poorly known phenomena that are pretty interesting. The quote from the title of my post comes near the end of the article, where somebody is claiming that fungus may create "microscopic patterns" that trick people into thinking they are nanodiamonds. On the nano-scale, wacky stuff is happening all around us -- did you know that ordinary water is full of nano-ice crystals all the time?

    UPDATE (2010-06-27): A reader:

    The earth passing thru a large cloud of cosmic dust could also explain the broad distribution of nanodiamonds.

    Not a bad idea.

  • Megafaunal meth

    Mon, 2010-05-24 22:30 -- John Hawks

    I've seen this story around the net today, so I thought I would link to the short research paper by Felisa Smith and colleagues: "Methane emissions from extinct megafauna." The idea is that the extinction of the mammoths, mastodons, horses, camels, steppe bison and other big herbivores may have helped trigger the Younger Dryas:

    Our calculations suggest that the late Pleistocene extinction resulted in a decreased annual methane flux of ~9.6 teragrams (Tg) (range 2.3 to 25.5 Tg; Supplementary Tables T1 and T2). Interestingly, ice-core records of methane concentration reveal an abrupt drop of >180 ppbv at the onset of the Younger Dryas cold event, about 12,800 years ago (Fig. 1). The drop seems to be synchronous with the extinction of New World megafauna.

    The reduction in atmospheric methane is documented by ice cores, and the paper shows that the loss of megafauna ight be enough to explain all of the reduction, or at least a large fraction of it. Methane is a more powerful greenhouse gas than carbon dioxide or water vapor. How much difference would it have made? That's the unanswered question.

    In light of my "Anthropocene" comments, I have to mention the way they end their letter:

    Thus, we propose that the onset of the 'Anthropocene' should be recalibrated to 13,400 years before present, coincident with the first large-scale migrations of humans into the Americas.

    Holy unnecessary interval, Batman! If we're going to make a geological epoch begin at the onset of the Younger Dryas, shouldn't it obviously be the Holocene?

    UPDATE (2010-05-25): From a reader:

    Given this new hypothesized cause for the onset of the Younger Dryas ends up being validated, a more precise/appropriate name should then be "Flatulocene".

    Yes, well, everyone, just tell them you caught wind if it here.

    References:

    Smith FA, Elliott SM, Lyons SK. 2010. Methane emissions from extinct megafauna. Nature Geosci (in press) doi:10.1038/ngeo877

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Neandertals

For years, I've worked on their bones. Now I'm working on their genes. Read more about the science studying these ancient people.

Denisova

From a finger bone of an ancient human came the record of a completely unexpected population. My lab is working on the science of the Denisova genome.

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The advent of agriculture caused natural selection to speed up greatly in humans. We're uncovering some of the ways that populations have rapidly changed during the last 10,000 years.

Malapa

Just outside Johannesburg, the Malapa site is producing some of the most exciting finds in human evolution. This site is the headquarters of the Malapa Soft Tissue Project.